[pre-commit.ci] pre-commit autoupdate #34

pre-commit-ci · 2025-11-10T16:59:51Z

updates:

…rization. Use _attr_optimize_finite_math.

* python/src/moocore/_moocore.py: Use it.

(check_hvc): check also maximise=True.

…nused. * c/mt19937/mt19937.h: Remove declarations.

…ization and vectorization.

updates: - [github.com/lorenzwalthert/precommit: v0.4.3.9014 → v0.4.3.9017](lorenzwalthert/precommit@v0.4.3.9014...v0.4.3.9017) - [github.com/tox-dev/tox-ini-fmt: 1.6.0 → 1.7.0](tox-dev/tox-ini-fmt@1.6.0...1.7.0) - [github.com/tox-dev/pyproject-fmt: v2.6.0 → v2.11.0](tox-dev/pyproject-fmt@v2.6.0...v2.11.0) - [github.com/astral-sh/ruff-pre-commit: v0.13.0 → v0.14.3](astral-sh/ruff-pre-commit@v0.13.0...v0.14.3) - [github.com/sphinx-contrib/sphinx-lint: v1.0.0 → v1.0.1](sphinx-contrib/sphinx-lint@v1.0.0...v1.0.1)

for more information, see https://pre-commit.ci

(print_rect): Rename to debug_print_rect.

codecov · 2025-11-10T17:11:09Z

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 73.13%. Comparing base (708f97d) to head (0f7bf23).

Additional details and impacted files

@@            Coverage Diff             @@
##             main      #34      +/-   ##
==========================================
- Coverage   73.21%   73.13%   -0.08%     
==========================================
  Files          58       58              
  Lines        5033     5033              
  Branches      964      964              
==========================================
- Hits         3685     3681       -4     
- Misses        971      974       +3     
- Partials      377      378       +1

Flag	Coverage Δ
R	`78.15% <ø> (ø)`
python	`72.26% <ø> (-0.10%)`	⬇️

Flags with carried forward coverage won't be shown. Click here to find out more.

Components	Coverage Δ
tests	`100.00% <ø> (ø)`
src	`86.96% <ø> (ø)`

🚀 New features to boost your workflow:

❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.

…lowest tests longer than 1 second. * python/tests/test_moocore.py (test_hv_approx): Avoid long test.

…EBUG.

* python/doc/source/_static/bench/ndsort_bench-ran-3d-time.png: Update. * python/doc/source/_static/bench/ndsort_bench-ran-4d-time.png: Update. * python/doc/source/_static/bench/ndsort_bench-ran-5d-time.png: Update.

…-computing sin() and cos().

* pyproject.toml[tools.mypy]: New. * src/moocore/_moocore.py: More type annotations. * src/moocore/_utils.py: Likewise.

* c/config.h: Undefine NDEBUG when DEBUG > 0. * c/hv_contrib.c: Use DEBUG1_PRINT to avoid warnings in R about stderr. * c/hv_priv.h: Likewise.

r/src/Rcommon.h: Use _attr_maybe_unused to silence warning.

* r/NEWS.md: Document it. * .github/workflows/R.yml: Bump minimum R version.

…ments.

updates: - [github.com/tox-dev/pyproject-fmt: v2.11.0 → v2.11.1](tox-dev/pyproject-fmt@v2.11.0...v2.11.1) - [github.com/astral-sh/ruff-pre-commit: v0.14.3 → v0.14.6](astral-sh/ruff-pre-commit@v0.14.3...v0.14.6) - [github.com/sphinx-contrib/sphinx-lint: v1.0.1 → v1.0.2](sphinx-contrib/sphinx-lint@v1.0.1...v1.0.2)

MLopez-Ibanez and others added 19 commits November 2, 2025 11:10

Start development of v0.2.0

53ece9f

c/hv4d.c (restart_base_setup_z_and_closest): Simplify. Help autovecto…

8f89f5e

…rization. Use _attr_optimize_finite_math.

c/eaf.c (eaf_check_polygons): Do not call polygons_intersect() twice.

09b4186

README.md, c/README.md: Fix testsuite badge.

faa5579

* python/src/moocore/_utils.py (_get_seed_for_c): New.

2b29d73

* python/src/moocore/_moocore.py: Use it.

* python/tests/test_moocore.py (test_hv_approx_default_seed): New test.

2224a59

(check_hvc): check also maximise=True.

* c/hv_priv.h (init_sentinels): Make sure HV_DIMENSION is correct.

dd1ddbb

* c/mt19937/mt19937.c (mt19937_init_by_array,init_genrand): Remove u…

9f4c5de

…nused. * c/mt19937/mt19937.h: Remove declarations.

c/Makefile (clean): Clean .i and .s.

5d5a7df

c/epsilon.c: Fix error message.

0232647

c/epsilon.h: Use _attr_optimize_finite_math. Improve function special…

b899ffc

…ization and vectorization.

[pre-commit.ci] auto fixes from pre-commit.com hooks

ccb2dd8

for more information, see https://pre-commit.ci

r/DESCRIPTION: Edit Description.

d443ecf

c/hvapprox.c: Simplify ASSUME conditions.

8290a66

README.md: Mention QuantumAnnealingMOO.

f28adef

README.md: Mention IOHinspector

958a090

* python/doc/source/whatsnew/index.rst: Fix link.

3dff60b

* c/whv.c (print_point): Rename to debug_print_point.

f40e169

(print_rect): Rename to debug_print_rect.

pre-commit-ci bot force-pushed the pre-commit-ci-update-config branch from 06d385a to 8ecfc23 Compare November 10, 2025 16:59

MLopez-Ibanez added 9 commits November 11, 2025 13:34

c/hv_priv.h: Use restrict for x.

cdde0c8

c/hv4d.c: Remove unlikely.

3654bd6

* c/gcc.mk: Add notes about GCC options.

d570c48

c/hv.c: Remove unused code.

8b8e97d

c/hv.c (fpli_setup_cdllist): Simplify.

52d521b

c/hv.c: Separate fpli_hv_ge5d() from hv_recursive(). Add debug counters.

da0f2f7

* c/gcc_attribs.h (ASAN_POISON_MEMORY_REGION): New.

ccba320

* c/hv.c: Merge fpli_dlnode_t into dlnode_t.

7eef75e

DEVEL-README.md, c/README.md: More details about building and testing.

bdc4689

MLopez-Ibanez added 7 commits November 17, 2025 09:47

python/Makefile (doc,fastdoc): Do not clean.

28689d6

* python/pyproject.toml: Set pytest timeout to 10 seconds. Print 5 s…

027dd30

…lowest tests longer than 1 second. * python/tests/test_moocore.py (test_hv_approx): Avoid long test.

python/src/moocore/_ffi_build.py: Add -march= to link flags. Handle D…

d1c52a4

…EBUG.

c/config.h: Make sure to disable assert() with DEBUG=0.

1df096b

c/io_priv.h: Formatting.

fc94226

c/nondominated.h (find_nondominated_set_agree_): Slight simplification.

2a7f920

c/pareto.c (pareto_rank_naive): Simplify.

c22f43e

MLopez-Ibanez force-pushed the main branch from 59babc6 to f4890aa Compare November 17, 2025 09:47

MLopez-Ibanez added 2 commits November 17, 2025 12:14

c/hvapprox.c (compute_hua_wang_direction): Help the vectorizer by pre…

708f97d

…-computing sin() and cos().

MLopez-Ibanez force-pushed the main branch from f4890aa to 708f97d Compare November 17, 2025 12:14

README.md: Mention seqme.

3209774

pre-commit-ci bot force-pushed the pre-commit-ci-update-config branch from 8ecfc23 to 0f7bf23 Compare November 17, 2025 16:56

MLopez-Ibanez and others added 9 commits November 19, 2025 10:52

python/ Improve typing.

4facb36

* pyproject.toml[tools.mypy]: New. * src/moocore/_moocore.py: More type annotations. * src/moocore/_utils.py: Likewise.

* c/common.h: Honor NDEBUG when building the R_PACKAGE.

5793261

* c/config.h: Undefine NDEBUG when DEBUG > 0. * c/hv_contrib.c: Use DEBUG1_PRINT to avoid warnings in R about stderr. * c/hv_priv.h: Likewise.

r/Makefile (check): Run with DEBUG=1

d2de9f6

r/src/Rcommon.h: Use _attr_maybe_unused to silence warning.

* r/DESCRIPTION: Require R >= 4.1.

89a24a9

* r/NEWS.md: Document it. * .github/workflows/R.yml: Bump minimum R version.

* python/benchmarks/bench.py: Add support for setup= and check= argu…

f73f5a7

…ments.

c/pareto.c (pareto_rank_2d): Simplify.

fcb69bb

c/io.h: Use restrict when appropriate.

b35ac44

python/tests/test_bugs.py (test_bug38): New test.

e03c25d

pre-commit-ci bot force-pushed the pre-commit-ci-update-config branch from 0f7bf23 to 11b55a6 Compare November 24, 2025 16:59

MLopez-Ibanez force-pushed the main branch 7 times, most recently from 1c1dbad to 0f60599 Compare November 24, 2025 23:23

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